Pathologic was missing because of a .git folder inside.

[yaffs-website] / web / modules / contrib / tocify / tocify.info.yml

name: Tocify
type: module
description: Tocify your content
# core: 8.x
package: Custom
dependencies:
  - block

# Information added by Drupal.org packaging script on 2017-05-03
version: '8.x-1.2'
core: '8.x'
project: 'tocify'
datestamp: 1493816712